PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV34828.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family FAR1
Protein Properties Length: 170aa    MW: 19684.3 Da    PI: 10.3629
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV34828.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR160.64.7e-191294290
        FAR1  2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90
                fY+eYA ++GF +r+ +s+ks+r+g+i++r + C  +   ++ +++        ++ r gC+ +l vk+e+ g+w+v k++ +HnH+l+
  KZV34828.1 12 FYEEYAGRIGFLTRTLSSRKSERDGSIISRGLGCRGNRDVQSPSHD------MGQKRREGCTSMLIVKRESIGRWVVRKFVRDHNHPLV 94
                **********************************877776666655......6778899****************************96 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031011.7E-161294IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 170 aa     Download sequence    Send to blast
MIFDSEDAAR TFYEEYAGRI GFLTRTLSSR KSERDGSIIS RGLGCRGNRD VQSPSHDMGQ  60
KRREGCTSML IVKRESIGRW VVRKFVRDHN HPLVISSPKK RPTFDEKDKT IQDLTAELRL  120
KKRLSAAYRD QLLALMRDVE NHNDSLTTQL QTIRSNLKEI DARRDDLPNH
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011073902.12e-88PREDICTED: protein FAR-RED IMPAIRED RESPONSE 1 isoform X2
SwissprotQ9SZL81e-14FRS5_ARATH; Protein FAR1-RELATED SEQUENCE 5
TrEMBLA0A022RAG64e-83A0A022RAG6_ERYGU; Uncharacterized protein
STRINGPGSC0003DMT4000694931e-79(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA130991718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43280.11e-51FAR1 family protein